
GA-PPI-Net Approach vs Analytical Approaches for Community Detection in PPI Networks
Ben M’Barek, M.; Hmida, Hmida; Borgi, Amel; Rukoz, Marta (2021), GA-PPI-Net Approach vs Analytical Approaches for Community Detection in PPI Networks, Procedia Computer Science, 192, p. 903-912. 10.1016/j.procs.2021.08.093
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Type
Article accepté pour publication ou publiéDate
2021Nom de la revue
Procedia Computer ScienceVolume
192Éditeur
Elsevier
Pages
903-912
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Métadonnées
Afficher la notice complèteAuteur(s)
Ben M’Barek, M.Laboratoire d'analyse et modélisation de systèmes pour l'aide à la décision [LAMSADE]
Hmida, Hmida
Laboratoire d'analyse et modélisation de systèmes pour l'aide à la décision [LAMSADE]
Borgi, Amel
Rukoz, Marta
Laboratoire d'analyse et modélisation de systèmes pour l'aide à la décision [LAMSADE]
Résumé (EN)
Community detection has become an important research direction for data mining in complex networks. It aims to identify topo-logical structures and discover patterns in complex networks, which presents an important problem of great significance. Prediction of communities from Protein-Protein Interaction (PPI) networks is important problem in system biology as they control different cellular functions. These networks represent a set of proteins that collaborate at the same cellular function. With the increment of genome-scale protein–protein interaction data for different species, various computational methods focus on identifying protein community from PPI networks. In this paper, we are interested in evaluating the proposed genetic algorithm GA-PPI-Net and three clustering methods for community detection. In the computational tests carried out in this work, the proposed genetic algorithm achieved excellent results to detect existing or even new communities from PPI networks.Mots-clés
Community detection; Genetic Algorithm; Clustering; Protein-protein interaction networks; Semantic SimilarityPublications associées
Affichage des éléments liés par titre et auteur.
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Ben M’barek, Marwa; Borgi, Amel; Ben Hmida, Sana; Rukoz, Marta (2020) Communication / Conférence
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Ben M’Barek, Marwa; Borgi, Amel; Ben Hmida, Sana; Rukoz, Marta (2020) Communication / Conférence
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Ben M'barek, Marwa; Borgi, A.; Ben Hmida, Sana; Rukoz, Marta (2020) Communication / Conférence
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Ben M'barek, Marwa; Borgi, Amel; Bedhiafi, Walid; Ben Hmida, Sana (2018) Article accepté pour publication ou publié
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Genetic Algorithm to Detect Different Sizes’ Communities from Protein-Protein Interaction Networks Ben M'barek, Marwa; Borgi, Amel; Ben Hamida, Sana; Rukoz, Marta (2019) Communication / Conférence